Writing Hub
AI governance essays, reasoning systems notes, experiment logs, and technical writing across BioAI and engineering practice.
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STEM-BIO-AI Audit Report: yorkeccak/bio
When a README Claim Meets a Deterministic Scanner

Beyond Repo Scanning: How AIRI Expanded the Risk Vocabulary in STEM BIO-AI 1.7.x
How STEM BIO-AI uses the MIT AI Risk Repository as a governed local risk-vocabulary layer without replacing deterministic repository scanning

When Control Becomes Authority: Calibration Governance in STEM BIO-AI 1.7.x
Why STEM BIO-AI treats calibration as governed policy instead of a free-form score-tuning console for bio and medical AI repository audits.

From Score to Workflow: Turning STEM BIO-AI Into a Local Audit System
Bio/medical AI trust should not collapse into one score. STEM BIO-AI v1.6.2 shows how deterministic auditing, evidence-led diagnostics, regulatory traceability, and bounded AI advisory can become an inspectable local workflow.

How Do You Trust the AI Auditor? STEM-AI v1.1.2 and Memory-Contracted Bio-AI Audits
STEM-AI v1.1.2 binds a bio/medical AI repository audit to a machine-checkable memory contract, then demonstrates it on a real open-source bioinformatics repository.

When an AI Pipeline Passes — But One Path Still Must Be Held: EXP-034
EXP-034 tested whether a method-locked Bio-AI governance pipeline could survive modal expansion, AlphaFold EBI observer wiring, and AG-live measurement without breaking its PASS/BLOCK judgment baseline.

The $100 Million Blind Spot: What No-Code Healthcare Builders Still Don't See
An analysis of how no-code and AI-generated healthcare apps create regulatory liability when patient data flows are deployed without prior mapping, auditability, or compliance architecture.

Bridging the Gap: From AI Slop to Mathematical Governance
A mathematical framework for detecting AI-generated code slop using AST distributions, Jensen-Shannon divergence, and geometric governance gates.

How Auditing 10 Bio-AI Repositories Shaped STEM-AI
After auditing 10 open-source Bio-AI repositories, we found blind spots in STEM-AI and expanded it from text-only review to code-aware trust evaluation.

After Auditing 10 Bio-AI Repositories, I Think We're Scaling the Wrong Layer
After auditing 10 open-source Bio-AI repositories, one pattern stood out: the field is scaling packaging faster than verification. Here is what that gap actually costs.

I Audited 10 Open-Source Bio-AI Repos. Most Could Produce Outputs. Few Could Establish Trust.
I audited 10 visible repositories. Most could produce outputs. Very few could establish what those outputs meant.

Bio-AI Repository Audit 2026: A Technical Report on 10 Open-Source Systems
We audited 10 prominent open-source Bio-AI repositories using code inspection and STEM-AI trust scoring. 8 of 10 scored T0: trust not established. Here is what the code actually shows.
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